Best Open Source Java Research Software for Windows

Java Research Software for Windows

Research Java Windows Clear Filters

Browse free open source Java Research Software for Windows and projects below. Use the toggles on the left to filter open source Java Research Software for Windows by OS, license, language, programming language, and project status.

Our Free Plans just got better! | Auth0
With up to 25k MAUs and unlimited Okta connections, our Free Plan lets you focus on what you do best—building great apps.

You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.

Try free now
Ship Agents Faster
Transform your applications and workflows into powerful agentic systems at global scale.

Gemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.

Get Started Free
1

DSpace

Open Source "turn-key" institutional repository application

Open Source Digital Asset Management system that enables services for access, provision, stewardship and re-use of digital assets with a focus on educational and research materials For Support, please see: https://wiki.lyrasis.org/display/DSPACE/Support RELEASES: The most recent releases are now distributed via GitHub: https://github.com/DSpace/DSpace/releases MAILING LISTS: Mailing lists have all been moved to Google Groups: https://wiki.lyrasis.org/display/DSPACE/Mailing+Lists

26 Reviews

Downloads: 55 This Week

Last Update: 2021-06-23
See Project
2

Hypernomicon

Hypertext-infused philosophy personal database software

Hypernomicon is a personal productivity/database application for researchers that combines structured note-taking, mind-mapping, management of files (e.g., PDFs) and folders, and reference management into an integrated environment that organizes all of the above into semantic networks or hierarchies in terms of debates, positions, arguments, labels, terminology/concepts, and user-defined keywords by means of database relations and automatically generated hyperlinks (hence ‘Hyper’ in the name). Hypernomicon keeps track of all these things in a highly structured, thoroughly indexed and user friendly relational database, automatically generates semantic hyperlinks between all of them, and presents this information in many different forms so that you are constantly informed of ways all of your information is related that you had not realized.

4 Reviews

Downloads: 26 This Week

Last Update: 2026-04-14
See Project
3

JaCoP

JaCoP is a Java Constraint Programming solver. It provides a significant number of (global) constraints to facilitate efficient modeling of combinatorial problems, as well as modular design of search. Documentation is available at project Web site. Please, note that the sources from version 4.0 are only available at GitHub.

11 Reviews

Downloads: 3 This Week

Last Update: 2026-01-27
See Project
4

choco

Choco is not hosted on sourceforge anymore. Please now visit http://choco-solver.org/ !

5 Reviews

Downloads: 2 This Week

Last Update: 2015-06-22
See Project
Custom VMs From 1 to 96 vCPUs With 99.95% Uptime
General-purpose, compute-optimized, or GPU/TPU-accelerated. Built to your exact specs.

Live migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.

Try Free
5

CERCA

CERCA – Citation Extraction & Reference Checking Assistant

CERCA is an open-source research tool that supports the verification of bibliographic references in scientific manuscripts. It extracts references from PDF files and checks their existence and consistency against authoritative metadata sources, producing explainable diagnostics, audit logs, and reproducible reports. It is intended for: - Researchers performing final manuscript checks - Reviewers assessing reference consistency - Editors supporting editorial quality control - Meta-research and reproducibility workflows CERCA is an experimental tool. It does not replace manual verification. CERCA is a Java desktop application built with JavaFX. To run it, you need a JRE that includes JavaFX, such as Azul Zulu JRE. Developed by: Lidiany Cerqueira, PhD Computer Science Researcher

Downloads: 6 This Week

Last Update: 2026-02-16
See Project
6

jMIR

Music research software

jMIR is an open-source software suite implemented in Java for use in music information retrieval (MIR) research. It can be used to study music in the form of audio recordings, symbolic encodings and lyrical transcriptions, and can also mine cultural information from the Internet. It also includes tools for managing and profiling large music collections and for checking audio for production errors. jMIR includes software for extracting features, applying machine learning algorithms, applying heuristic error error checkers, mining metadata and analyzing metadata.

3 Reviews

Downloads: 3 This Week

Last Update: 2018-06-25
See Project
7

Open Library Mangement System

Open Library Mangement System

The Open Library Mangement System is a project to create a web based system to help mange library's everywhere.

Downloads: 5 This Week

Last Update: 2013-06-24
See Project
8

jCompoundMapper

Library for fingerprinting (decomposition) of chemical compounds. It has several tweaking possibilities and exporting options for data mining toolkits.

Downloads: 5 This Week

Last Update: 2014-03-06
See Project
9

Docear

An Academic Literature Suite

Docear (pronounced dog-ear) is what we call an “academic literature suite”. It integrates everything you need to search, organize and create academic literature in a single application: a digital library, reference manager, PDF and file manager, note taking and mind mapping. And the best: Docear works seemlessly with many existing tools like Mendeley, Microsoft Word, and Foxit Reader. Docear is free and open source, based on Freeplane, funded by the German Federal Ministry of Technology and developed by scientists from around the world, among others from OvGU, and the University of California, Berkeley.

7 Reviews

Downloads: 1 This Week

Last Update: 2014-05-21
See Project
Enterprise-grade ITSM, for every business
Give your IT, operations, and business teams the ability to deliver exceptional services—without the complexity.

Freshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.

Try it Free
10

MoRe4ABM

Managing Ongoing RElationships for Agent-Based Modelling

The purpose of MoRe4ABM - Managing Ongoing RElationships for ABM - is to support representing and analysing social networks in agent-based modeling. The library provides a large number of network generators and a comprehensive framework for network and node level measures. It integrates well with Repast Simphony and uses the JUNG library. More4ABM furthermore supports initialisation of geographically explicit networks using GIS.

Downloads: 3 This Week

Last Update: 2016-09-28
See Project
11

FreeCell Java Solver

This is a FreeCell solitaire game solver written in the Java. It is fast and capable - it solves all of the first million Microsoft deals in about 4 hours - 99.99% of them in less than a second, and no deal takes more than 1 minute.

Downloads: 2 This Week

Last Update: 2014-08-01
See Project
12

MolMarker

Java software to evaluate the results obtained by molecular markers

Journal article to cite: Jahnke, G.; Smidla, J.; Poczai, P. MolMarker: A Simple Tool for DNA Fingerprinting Studies and Polymorphic Information Content Calculation. Diversity 2022, 14, 497. https://doi.org/10.3390/d14060497 Leave a review, please! Your opinion matters! :-) MolMarker is user-friendly software to help evaluate the research results obtained by molecular markers. The software can handle genetic (e.g. SSR) and biochemical (e.g. isozyme) data, can construct similarity matrices and UPGMA or NJ dendograms. It can calculate the frequencies of null alleles in the case of genetic data as well as H (heterosigosity) and PIC (polymorphic Information Content) values. Parentage analyses gives a list of possible parent-offspring combinations, and likelihood ratio statistics corresponding to the detected combinations. For details see MolMarker Manual.pdf

1 Review

Downloads: 1 This Week

Last Update: 2022-06-19
See Project
13

Ceka

Crowd Environment and its Knowledge Analysis

A knowledge analysis tool for crowdsourcing based on Weka. We also have a Python version of Crowdsourcing Learning: CrowdwiseKit on GitHub (https://github.com/tssai-lab/CrowdwiseKit).

Downloads: 1 This Week

Last Update: 2023-04-20
See Project
14

ReBAC Java Library

ReBAC library for java development

Java library for Relationship Based Access Control (ReBAC). Provides a general framework creating ReBAC policies and model checking. Also provides tools for testing. Obtain latest version as a Maven Dependency: <dependency> <groupId>ca.ucalgary.ispia</groupId> <artifactId>rebac</artifactId> <version>0.1.7</version> </dependency>

Downloads: 1 This Week

Last Update: 2017-10-24
See Project
15

Simple API for Binary REpresentations

This project defines the Simple API for Binary REpresentations (SABRE) for processing hierarchically structured, binary-oriented documents, comparable to the Simple API for XML (SAX). The library is e.g. used in the Java ISO Image Creator (JIIC).

Downloads: 1 This Week

Last Update: 2013-05-02
See Project
16

AMPdoc

Apache, MySQL, PHP package for library, archive, museum automation

AMPdoc mblazquez edition is a portable package with Apache, MySQL, PHP, and Perl which includes a selection of documentary software applications for libraries, archives, museums, publishers, conferences and documentation centers. AMPdoc mblazquez edition enables to perform workflow management duties, publication of contents, web positioning, among others. Usually, difficulty in installing and configuring of necessary applications has limited the access to technologies to information professionals. With AMP doc mblazquez edition any information professional can use different documentary software in accordance with his needs, without requiring installation. In addition, it can run on any computer running Windows. This package seeks to democratize Documentary Technologies, providing support and contributes to moving towards modernization and the update of knowledge in this area.

1 Review

Downloads: 0 This Week

Last Update: 2015-06-09
See Project
17

AMPdoc Black Sun

Apache, MySQL, PHP package for manage syndication channels feeds

1 Review

Downloads: 0 This Week

Last Update: 2015-06-21
See Project
18

BPMN extension for Cloud computing

java project for modifying jBPM models into cloud aware models

Program based on created BPMN 2.0 Cloud extension. It reads a model *.bpmn, which was created using jBPM BPMN 2.0 modeling tool. Then user is able to define a sensitivity of data elements. After that an Ontology is created and filled in with model elements. Special logical rules process the data. User is able to additionally define the security level. The resulting model is created and can be opened in the jBPM.

Downloads: 0 This Week

Last Update: 2015-03-16
See Project
19

Biomedical Information Management System

Biomedical Information Management System (BIMS) is a modular multilayer object - oriented software architecture, which provides a flexible computational solution to capture and manage a heterogeneous biomedical data: textual and visual information.

Downloads: 0 This Week

Last Update: 2013-04-18
See Project
20

Bracer

Repository has been moved to: http://dtitov.github.com/bracer

Java library for parsing and evaluating math expressions. Javadoc is available at http://bracer.sourceforge.net/javadoc/ P.S. This library depends on Apache Commons Math, so don't forget to include commons-math-2.2.jar to your project.

Downloads: 0 This Week

Last Update: 2012-07-08
See Project
21

CBIRColor

This is a Content Based Image Retrieval Interface with only color features implemented. This is part of a thesis work to analyze the different color features and observe the performance on mainly corel5k images.

Downloads: 0 This Week

Last Update: 2014-07-01
See Project
22

Centre d'informations (CI)

Not a search engine but navigation routes within a research domain.

The Centre d'Informations (CI) aim is to articulate and display whatever type of knowledge available on a given field (see screenshots examples for various fields). The software is built as a network of information articulated using concepts (figure). The website should not be understood as a conventional search engine but as different ways to navigate within this knowledge (information and concept) network. Each information is thoroughly formalized; the aim is not exhaustivity or information amount but rather information quality so as to ensure the best possible articulation within the existing network (quality of the network) and ensure the subject diversity so as to cover the field with robustness.

Downloads: 0 This Week

Last Update: 2015-04-30
See Project
23

Chemical and structural biology editor

Graphical editor using HTML5 canvas for input of chemical structures, molecule interactions, as well as protein sequence and 3D structural motifs. Facilitates searches in chemo-informatics, bioinformatics and structural biology .

Downloads: 0 This Week

Last Update: 2013-04-18
See Project
24

Conway's Game Of Life

A simple Java class for Conway's Game of Life

See http://en.wikipedia.org/wiki/Conway%27s_Game_of_Life for the rules of the game.

Downloads: 0 This Week

Last Update: 2013-05-30
See Project
25

Damon

Damon is a Distributed AOP Middleware on top of a p2p Overlay Network. Its main aim is to offer the necessary abstractions and services to develop distributed aspects, and to provide scalability to existent or new applications transparently.

Downloads: 0 This Week

Last Update: 2013-04-02
See Project