PR #157 was about upper/lower case differences in the REF column:
bcfools merge was failing due to a case (as in upper/lower) difference between the REFs.
A fix was made (1f81d25), but this does not appear to be completely fixed. e.g. in test/merge.2.b.vcf change 1:3200010's REF from C to c, and the test/merge.2.none.out test case now fails.
PR #157 was about upper/lower case differences in the REF column:
A fix was made (1f81d25), but this does not appear to be completely fixed. e.g. in test/merge.2.b.vcf change 1:3200010's REF from
Ctoc, and the test/merge.2.none.out test case now fails.