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202 followers · 27 following

Achievements

Achievement: Pair Extraordinairex3Achievement: Galaxy Brainx4Achievement: QuickdrawAchievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx4Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex3Achievement: Galaxy Brainx4Achievement: QuickdrawAchievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx4Achievement: Arctic Code Vault Contributor

Organizations

@samtools @wormtable @mcveanlab @conda-forge @bioconda @zarr-developers @tskit-dev @popsim-consortium @sgkit-dev

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  1. tskit-dev/msprime tskit-dev/msprime Public

    Simulate ARGs and genomic sequence data using population genetic models

    Python 215 93

  2. tskit-dev/tskit tskit-dev/tskit Public

    Population-scale Ancestral Recombination Graph (ARG) library

    Python 184 84

  3. tskit-dev/tsinfer tskit-dev/tsinfer Public

    Infer a tree sequence from genetic variation data.

    Python 63 17

  4. sgkit-dev/bio2zarr sgkit-dev/bio2zarr Public

    Convert bioinformatics file formats to Zarr

    Python 47 13

  5. sgkit-dev/vcztools sgkit-dev/vcztools Public

    Partial reimplementation of bcftools for VCF Zarr

    Python 25 6