Research Computing Specialist at REANNZ, based in Dunedin, New Zealand.
- eResearch Infrastructure — building and supporting research computing platforms (NeSI, OOD, RStudio Server)
- Bioinformatics — genomics workflows, data wrangling, next-gen sequencing analysis
- Data Science — R, Python, visualisation, reproducible research
- Teaching — Carpentries instructor; workshops in R, genomics, and data analysis
| Repo | Description |
|---|---|
| eri-support-docs | eRI support documentation |
| REANNZ Training Environment | NeSI/REANNZ cloud training platform for workshops |
| Repo | Description |
|---|---|
| ML101 — Counting Spots | Introductory machine learning workshop |
| ML102 — Image Analysis | Machine learning for image analysis |
| ML103 — Large Language Models | Getting started with LLMs on NeSI |
| Introduction to R | Introduction to R for genomics |
| Intermediate R | Intermediate R workshop material |
| Shell for Bioinformatics | Intermediate-advanced shell for bioinformatics |
| Bash Scripting & HPC | Automating genomic analysis on HPC |
| RNA-seq Workshop | RNA-seq data analysis |
| RNA-seq On Demand | RNA-seq workshop on REANNZ training platform |
| Imputation Workshop | Genotype imputation workshop |
| Visualisation Day | Data visualisation beyond the code |
| Repo | Description |
|---|---|
| spain | Our Spanish Travel Log |
📧 matt.bixley@reannz.co.nz · 📧 mattbixley72@gmail.com · 📍 Dunedin, New Zealand
